<div dir="ltr">Hi Eric,<div><br></div><div>if you're on Windows, it might be because you don't have MPICH installed. I had exactly the same problem and following the instructions under Download AMICA - Binary files fixed it for me.</div><div><br></div><div><a href="https://sccn.ucsd.edu/~jason/amica_web.html">https://sccn.ucsd.edu/~jason/amica_web.html</a><br></div><div><br></div><div>Note that it might not work in a parfor loop, so first try calling it sequentially for each dataset.</div><div><br></div><div><br></div><div>Best,</div><div>Mircea</div></div><div class="gmail_extra"><br><div class="gmail_quote">On Wed, Oct 11, 2017 at 11:40 PM, Eric Rawls <span dir="ltr"><<a href="mailto:elrawls@email.uark.edu" target="_blank">elrawls@email.uark.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Hi all,<div>I am interested in trying Jason Palmer's AMICA algorithm out but I am having trouble getting it to run in any form. When I try running it from the gui with defaut settings, I get the output:</div><div><br></div><div><div>Found datfile</div><div>mkdir: /Users/admin/path_to_data/<wbr>amicaout/: File exists</div><div> 1 processor name = local-705.local</div><div> 1 host_num = 125801682</div><div> This is MPI process 1 of 1 ; I am process 1 of</div><div> 1 on node: local-705.local</div><div> 1 : node root process 1 of 1</div><div>Processing arguments ...</div><div> num_files = 2</div><div> FILES: </div><div> /Users/admin/path_to_data/<wbr>data.fdt</div><div> num_dir_files = 1 1</div><div> initial matrix block_size = 128</div><div> do_opt_block = 0</div><div> blk_min = 256</div><div> blk_step = 256</div><div> blk_max = 1024</div><div> number of models = 1</div><div> max_thrds = 2</div><div> use_min_dll = 1</div><div> min dll = 1.000000000000000E-009</div><div> use_grad_norm = 1</div><div> min grad norm = 1.000000000000000E-007</div><div> number of density mixture components = 3</div><div> pdf type = 0</div><div> max_iter = 2000</div><div> Error: num_samples entries is less than num_files in paramfile</div><div>No gm present, setting num_models to 1</div><div>No W present, exiting</div><div>Reference to non-existent field 'W'.</div><div><br></div><div>Error in runamica15 (line 873)</div><div> weights = mods.W(:,:,1);</div><div><br></div><div>Error in pop_runamica (line 239)</div><div> [W,S,mods] = runamica15(datfile,arglist{:})<wbr>;</div><div> </div><div>Error while evaluating Menu Callback</div></div><div><br></div><div><br></div><div>When I call runamica15 ( [EEG.icaweights EEG.icasphere] = runamica15(EEG)) directly, same message. I tried downloading the binary again in case that was the issue but no luck. What am I doing wrong here?</div><span class="HOEnZb"><font color="#888888"><div><br></div><div>Eric Rawls</div><div>Graduate Research Assistant</div><div>University of Arkansas</div></font></span></div>
<br>______________________________<wbr>_________________<br>
Eeglablist page: <a href="http://sccn.ucsd.edu/eeglab/eeglabmail.html" rel="noreferrer" target="_blank">http://sccn.ucsd.edu/eeglab/<wbr>eeglabmail.html</a><br>
To unsubscribe, send an empty email to <a href="mailto:eeglablist-unsubscribe@sccn.ucsd.edu">eeglablist-unsubscribe@sccn.<wbr>ucsd.edu</a><br>
For digest mode, send an email with the subject "set digest mime" to <a href="mailto:eeglablist-request@sccn.ucsd.edu">eeglablist-request@sccn.ucsd.<wbr>edu</a><br></blockquote></div><br></div>
<br>
<hr style="color:#999999;" size="1">
<p style="font-size:x-small; color:#999999;">Universitätsklinikum Hamburg-Eppendorf; Körperschaft des öffentlichen Rechts; Gerichtsstand: Hamburg | <a href="http://www.uke.de">www.uke.de</a><br>
Vorstandsmitglieder: Prof. Dr. Burkhard Göke (Vorsitzender), Prof. Dr. Dr. Uwe Koch-Gromus, Joachim Prölß, Martina Saurin (komm.)</p>
<hr style="color:#999999;" size="1">
<p style="font-size:x-small; color:#999999;">SAVE PAPER - THINK BEFORE PRINTING</p>