[Eeglablist] topoplot incompatibility

Simon-Shlomo Poil poil.simonshlomo at gmail.com
Wed Nov 7 15:23:13 PST 2012


Dear Angel,

To me it sounds like an issue with the function 'griddata' ..

Could you check the following lines in your Topoplot function.
 Do
edit topoplot

and check that line 956 to 962 are:
 try
      [Xi,Yi,Zi] = griddata(inty,intx,double(intValues),yi',xi,'v4'); %
interpolate data
      [Xi,Yi,ZiC] = griddata(inty,intx,double(intContourVals),yi',xi,'v4');
% interpolate data
  catch,
      [Xi,Yi,Zi] = griddata(inty,intx,intValues',yi,xi'); % interpolate
data (Octave)
      [Xi,Yi,ZiC] = griddata(inty,intx,intContourVals',yi,xi'); %
interpolate data
  end;

If you use the EEGlab version packed with NBT you should have those lines..


-Simon


2012/11/7 Makoto Miyakoshi <mmiyakoshi at ucsd.edu>

> Dear Angel,
>
> Ok, did you set up with your channels already? Do they have names and
> positions? What does your EEGLAB main GUI say about your channels?
> Does not it say (labels only)?
>
> Makoto
>
> 2012/11/7 Angel Tabullo <angeltabullo at yahoo.com>:
> > Dear Makoto:
> >
> > No, I cannot see any topography, not from individual ERPs or ICA plots or
> > from studies.
> >
> > ________________________________
> > De: Makoto Miyakoshi <mmiyakoshi at ucsd.edu>
> > Para: Angel Tabullo <angeltabullo at yahoo.com>
> > CC: "eeglablist at sccn.ucsd.edu" <eeglablist at sccn.ucsd.edu>
> > Enviado: Miércoles, 7 de noviembre, 2012 2:30 P.M.
> > Asunto: Re: [Eeglablist] topoplot incompatibility
> >
> > Dear Angel,
> >
> > Let me confirm if you can plot your IC topographies. Can you see them
> > without any problem?
> >
> > Makoto
> >
> > 2012/11/2 Angel Tabullo <angeltabullo at yahoo.com>:
> >> Hi everyone! I have installed MATLAB 2012 in order to use the NBT plugin
> >> for
> >> EEGLAB, but since then I've been unable to get any kind of topography
> >> plot,
> >> neither from EEGLAB nor NBT. This includes study plots, topographies
> from
> >> individual subjects and ICA plots.
> >>
> >> This is the kind of error message I get:
> >>
> >> Error using griddata (line 70)
> >> Unknown method.
> >>
> >> Error in topoplot (line 956)
> >>  [Xi,Yi,Zi] = griddata(inty,intx,intValues,yi',xi,'invdist'); %
> >>  interpolate data
> >>
> >> Error in std_chantopo (line 284)
> >>            topoplot( tmpplot, opt.chanlocs, 'style', 'map',
> >>            'shading', 'interp');
> >>
> >> Error in std_erpplot (line 347)
> >>        std_chantopo(erpdata, 'condnames', STUDY.condition,
> >>        'plottopo', fastif(length(allinds)==1, 'off', 'on'), ...
> >>
> >> Error in pop_chanplot (line 302)
> >>            eval(a); STUDY.history =  sprintf('%s\n%s',
> >>            STUDY.history, a);
> >>
> >> Error using waitfor
> >> Error while evaluating uicontrol Callback
> >>
> >> Did anybody had the same problem? Do I need other version of topoplot
> that
> >> is compatible with the latest Matlab? If so, where do I get it?
> >>
> >> Many thanks in advance!
> >>
> >> _______________________________________________
> >> Eeglablist page: http://sccn.ucsd.edu/eeglab/eeglabmail.html
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> >
> >
> >
> > --
> > Makoto Miyakoshi
> > JSPS Postdoctral Fellow for Research Abroad
> > Swartz Center for Computational Neuroscience
> > Institute for Neural Computation, University of California San Diego
> >
> >
>
>
>
> --
> Makoto Miyakoshi
> JSPS Postdoctral Fellow for Research Abroad
> Swartz Center for Computational Neuroscience
> Institute for Neural Computation, University of California San Diego
>
> _______________________________________________
> Eeglablist page: http://sccn.ucsd.edu/eeglab/eeglabmail.html
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>



-- 
-- 
Simon-Shlomo Poil

Center of MR-Research
University Children’s Hospital Zurich

Mobile number: +41 (0)76 399 5809
Office number: +41 (0)44 266 3129
Skype: poil.simonshlomo
Webpage: http://www.poil.dk/s/ and http://www.nbtwiki.net and
http://www.kispi.uzh.ch/Kinderspital/Medizin/mrzentrum_en.html
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