[Eeglablist] Computing ERSPs in parallel?
Tom Bullock
thomas.bullock at psych.ucsb.edu
Fri May 1 09:53:02 PDT 2015
Hello EEGLAB community,
I'm using the STUDY function to compute ERSPs for a dataset with 18
subjects and 3 conditions per subject. The ERSPs take a number of hours
to compute, so I'd like to set up a parfor loop to create the
"xxx.datersp" files in parallel using our distributed processing network.
This post indicates that it should be possible to set up the parfor
loop: http://sccn.ucsd.edu/pipermail/eeglablist/2014/008914.html .
However I'm not sure which of the functions involved in the ERSP
computation is the one I should attempt to parallelize (std_precomp.m,
std_ersp.m or newtimef.m?), and which of the for loops I should be editing.
Does anyone have any insight into how to set this up?
Thanks!
Tom
p.s. this is the function I'm currently using to create the ERSPs:
[STUDY ALLEEG] = std_precomp(STUDY, ALLEEG,
{},'interp','on','recompute','on','ersp','on','erspparams',...
{'cycles' cycleParam 'nfreqs' 27 'timesout' [0:100:3000] 'freqs' [4
30] },'itc','off');
--
Tom Bullock, PhD
Postdoctoral Researcher, Department of Psychological and Brain Sciences,
University of California, Santa Barbara, CA 93106-9660
bullock at psych.ucsb.edu
https://labs.psych.ucsb.edu/giesbrecht/barry/Attention_Lab/Tom_Bullock.html
www.linkedin.com/in/tomwbullock
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