[Eeglablist] Changing group/condition after precomputation

Makoto Miyakoshi mmiyakoshi at ucsd.edu
Wed Dec 2 15:07:41 PST 2015


Dear Chantelle,

> Makoto (or anyone else) do you have any suggestions on how to speed up
the rate of precomputing ERSPs?

I sometimes create multiple STUDYs with split subjects but with the same
design. You can use the precomputed measure later as long as the same
subjects and design are used.

Makoto

On Wed, Dec 2, 2015 at 10:56 AM, Kinzel, Chantelle C <
CKinzel at mednet.ucla.edu> wrote:

> If that is the case then in theory, you could take out of the design all
> the subjects you want to change and add them back in labeled under the new
> condition, or the subject ID labeled as something slightly different from
> the original to designate them as the new condition then precompute just
> those new ones. This could save some amount of time precomputing, although
> still not ideal to your goal of avoiding having to re-do the
> precomputation.
>
> Makoto (or anyone else) do you have any suggestions on how to speed up the
> rate of precomputing ERSPs?
>
> -Chantelle.
>
>
> ------------------------------
> *From:* eeglablist-bounces at sccn.ucsd.edu [eeglablist-bounces at sccn.ucsd.edu]
> on behalf of Makoto Miyakoshi [mmiyakoshi at ucsd.edu]
> *Sent:* Wednesday, December 02, 2015 10:42 AM
> *To:* Iman Mohammad-Rezazadeh
> *Cc:* EEGLAB List
> *Subject:* Re: [Eeglablist] Changing group/condition after precomputation
>
> Dear Iman,
>
> > Does anyone have any SUCCESSFUL experience about changing
> group/condition for a subject(s) at STUDY level and *after precomputation*
> .
>
> No. If I understand correctly, STUDY design does not have such post-hoc
> flexibility at all. If you change STUDY design, you need to precompute
> everything again. A small exception may be that when you add subjects you
> can precompute the additional ones with the same STUDY design but with
> different STUDY and integrate into the original STUDY later; you can start
> from preculustering in this case.
>
> Makoto
>
> On Tue, Dec 1, 2015 at 3:01 PM, Iman Mohammad-Rezazadeh <
> irezazadeh at ucdavis.edu> wrote:
>
>> Hi EEGLABers,
>>
>> Does anyone have any SUCCESSFUL experience about changing group/condition
>> for a subject(s) at STUDY level and *after precomputation*. I have been
>> trying to write a script to change STUDY.design data ( see below) and then
>> realized that I have to change STUDY.datasetinfo . I did that but again
>> when I plot the subject data which I changed its grp/condition the old
>> labels showed up in the plot. Then I found I have to change STUDY.changrp
>> as well but it really complicated and hard to track the script.
>>
>> Any suggestions?
>>
>> Best,
>>
>> Iman
>>
>> function
>> STUDY=Change_Subject_Var(STUDY,design_no,case_no,var_no,new_var_name)
>>
>> %Change_Subject_Var(STUDY,design_no,case_no,var_no,new_var_name)
>>
>> no_file=length(STUDY.design(1).cell);
>>
>> for i=1:no_file
>>
>>     temp_case=STUDY.design(design_no).cell(i).case;
>>
>>     if strcmp(temp_case,case_no)
>>
>>         STUDY.design(design_no).cell(i).value(var_no)=new_var_name;
>>
>>     end
>>
>> end
>>
>>
>>
>> no_file=length(STUDY.datasetinfo);
>>
>> for i=1:no_file
>>
>>     temp_case=STUDY.datasetinfo(i).subject;
>>
>>     if strcmp(temp_case,case_no)
>>
>>         STUDY.datasetinfo(i).group=cell2mat(new_var_name);
>>
>>
>>
>>
>>
>>     end
>>
>> end
>>
>>
>>
>>
>>
>>
>>
>>
>>
>> end
>>
>>
>>
>>
>>
>
>
>
> --
> Makoto Miyakoshi
> Swartz Center for Computational Neuroscience
> Institute for Neural Computation, University of California San Diego
>
> ------------------------------
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-- 
Makoto Miyakoshi
Swartz Center for Computational Neuroscience
Institute for Neural Computation, University of California San Diego
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