[Eeglablist] EEGLAB data structure layout problems
E.C. Rocheteau
ecr38 at cam.ac.uk
Wed Jul 20 06:46:16 PDT 2016
Dear List,
I'm having some problems with EEGLAB data structures, and I would be
most grateful for any help. I'm a new user of EEGLAB, so please bear
with me!
I had a problem with getting my data into EEGLAB from the software that
I was using (TDT technologies; my data are LFPs, rather than EEG, from
ferret auditory cortex). I ended up importing the data into MATLAB using
a different route and then mimicking the data structure to produce:
EEG =
setname: 'BIM100E06V'
filename: ''
filepath: ''
subject: ''
group: ''
condition: ''
session: []
comments: []
nbchan: 32
trials: 28
pnts: 894
srate: 595.4650
xmin: -0.5000
xmax: 1
times: [1x894 double]
data: [32x894x28 single]
icaact: []
icawinv: []
icasphere: []
icaweights: []
icachansind: []
chanlocs: [1x32 struct]
urchanlocs: []
chaninfo: [1x1 struct]
ref: 'common'
event: []
urevent: []
eventdescription: {}
epoch: []
epochdescription: {}
reject: [1x1 struct]
stats: [1x1 struct]
specdata: []
specicaact: []
splinefile: []
icasplinefile: ''
dipfit: []
history: '…'
saved: 'no'
etc: []
speiciaact: []
datfile: ''
The data field is channels*frames*trials.
I have two questions really:
1: Do any of you see any problems with what I've done? Am I going to
have problems further down the line from this data format?
2: My main problem is the 'chanlocs' field. My data is taken from a 4X4
multielectrode array in the auditory cortex from each side of the head.
I want to tell EEGLAB where the channels were located, but I don't have
any form of location file from the recording software. I tried to
manually do it like before, but it doesn't seem to be compatible at all.
All I want, is for EEGLAB to plot it on a grid structure rather than a
human head, taking the first 16 channels for the left side and the
second set for the right side. If I could overlay that on a 2D picture
of the cortex regions, that would be fantastic.
Here was my attempt:
EEG.chanlocs =
1x32 struct array with fields:
theta
radius
labels
sph_theta
sph_phi
sph_radius
X
Y
Z
ref
type
urchan
All the fields are empty except for X, Y, and Z, which I filled in with
an arbitrary choice of regular grid coordinates, which I thought would
have plotted it across two 2D grids.
Do any of you have any suggestions? I would be most grateful!!
--
Best Wishes,
Emma
Undergraduate Medical Student
University of Cambridge
More information about the eeglablist
mailing list