[Eeglablist] NFT plugin and RELICA to reproduce Acar and Makeig 2020 (BIBE)

Zeynep Akalin Acar zeynep at sccn.ucsd.edu
Tue Sep 21 12:44:21 PDT 2021


Here is the link:

https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_sccn_NFT-5Ftest&d=DwIFaQ&c=-35OiAkTchMrZOngvJPOeA&r=kB5f6DjXkuOQpM1bq5OFA9kKiQyNm1p6x6e36h3EglE&m=UUqgaLgQVie_QuMaKznpEWlvwZTpu1F4jDBQHNNq5yM&s=JHKLOd6-kiZWUWAdZLrRs3y5E3nc30RXJU4yOCJWlVA&e= 

Thanks,
Zeynep

On Tue, Sep 21, 2021 at 10:53 AM Clement Lee via eeglablist <
eeglablist at sccn.ucsd.edu> wrote:

> Hi Zeynep,
>
> Is there a permalink to your NFT demo data, or could you please share a new
> link with Ceolini here who is interested in replicating your pipeline?
>
> Thanks,
> Clement Lee
> Applications Programmer
> Swartz Center for Computational Neuroscience
> Institute for Neural Computation, UC San Diego
> 858-822-7535
>
>
> On Tue, Sep 21, 2021 at 7:57 AM Ceolini, E. (Enea) via eeglablist <
> eeglablist at sccn.ucsd.edu> wrote:
>
> > Dear all
> >
> > I am very interested in reproducing the pipeline for source localisation
> > that was proposed in this BIBE 2020 paper (
> >
> https://urldefense.proofpoint.com/v2/url?u=https-3A__ieeexplore.ieee.org_document_9288020&d=DwIGaQ&c=-35OiAkTchMrZOngvJPOeA&r=kB5f6DjXkuOQpM1bq5OFA9kKiQyNm1p6x6e36h3EglE&m=wu9jYMcDx7y_who5XJ1_eUR2KnOXEiNP-qtcb6Dgd5c&s=xJkMBjxKxr7Bn6F_d_Rn9vQoPuk66k06Eu8HUfApYN0&e=
> > ) by Acar and Makeig.
> >
> > In particular I am interested in reproducing the step described in
> Section
> > II paragraph C were the authors used RELICA to estimate the noise
> > covariance matrix for the subsequent SCS: “When we used the variance of
> ICs
> > across the bootstrap clusters as the noise covariance matrix in SCS,..."
> >
> > I am following the paper and the associated slides from the EEGLAB
> > workshop (
> >
> https://sccn.ucsd.edu/githubwiki/files/eeglab2021_high_resolution_source_imaging.pdf
> )
> > and I have located (almost) all of the components except for the demo
> > folders that is cited at the end of the presentation. I think they are
> > supposed to be available at this link (
> > https://rdl-share.ucsd.edu/message/U7F0uMivgbGZJur64TXDac) but the link
> > appears to be broken.
> >
> > I believe the demo could really help me understand how to interface the
> > RELICA output with the NFT plugin and in particular with the SCS method.
> > Could anyone help me locate these demo?
> >
> > Thank you in advance for your time and your help,
> >
> > Best regards,
> >
> > +Enea
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