[Eeglablist] Question about IClabel

[Velu Prabhakar Kumaravel]

Hi Renzo,

Check the variable *EEG.reject.gcompreject *if it contains the flagged IC
components.

Best,
Velu

On Sat, Nov 25, 2023, 08:21 Renzo Lanfranco via eeglablist <
eeglablist at sccn.ucsd.edu> wrote:

> Hi all,
>
> I have a question about IClabel. I’ve been using it to reject ICA
> components using specific thresholds for each component category. However,
> I’m trying to add it to my preprocessing pipeline, and I haven’t found a
> way to suppress the window that pops up when the components have been
> flagged and are about to be rejected:
>
> This is the relevant snippet:
>
> EEG = iclabel(EEG, 'default');
> EEG = pop_icflag(EEG, [NaN NaN; 0.70 1; 0.70 1; 0.70 1; 0.70 1; 0.70 1;
> NaN NaN]); % 70% threshold for ICA rejection: Brain, Muscle, Eye, Heart,
> Line noise, Channel noise, Other.
> EEG = pop_subcomp(EEG);
>
>
> When the script reaches the pop_subcomp function, the window pops up
> asking “do you confirm that you want to delete “ etc etc. In the
> pop_subcomp function, it says that if you specify the list of components to
> delete, then said window won’t pop up. Do you know how to specify this when
> the components to delete have been flagged by iclabel? More specifically,
> by the pop_icflag component.
>
> Thanks in advance!
> Renzo
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