[Eeglablist] I can't get AMICA 12 to work through MATLAB

Alisha Kozlovsky alishakozlovsky at gmail.com
Sat Jul 26 22:11:35 PDT 2014


Hi Tyler,

Thank you very much! I did what you said and AMICA was able to run.

I had to change all the folder names that have a "space" in them (e.g. 
amica matlab -> amica_matlab) and then it was able to work.

Thanks, Tyler!

Alisha Kozlovsky
Simon Fraser University

On 26/07/2014 4:47 PM, Tyler Grummett wrote:
> Try putting an underscore between amica matlab
>
> Sent from my iPhone
>
> On 27 Jul 2014, at 2:48 am, "Alisha Kozlovsky" 
> <alishakozlovsky at gmail.com <mailto:alishakozlovsky at gmail.com>> wrote:
>
>> Hi friends,
>>
>> I am trying to run AMICA using data I have loaded in EEGLab.
>>
>> I typed in the following into the MATLAB command line:
>>
>>  [ EEG.icaweights, EEG.icasphere, mods ] = runamica12( EEG.data(:,:) );
>>
>> After that, I received this error:
>>
>> The system cannot find the path specified.
>> The system cannot find the path specified.
>> The system cannot find the path specified.
>> No recognized parallel environment found. Run qconf -spl to get a 
>> list of available environments and use keyword use_pe.
>> Running locally with maximum of 4 threads.
>> Writing data file: C:\Users\Ali Kozlovsky\Desktop\amica 
>> matlab\tmpdata27850.fdt
>> A subdirectory or file C:\Users\Ali already exists.
>> Error occurred while processing: C:\Users\Ali.
>> A subdirectory or file Kozlovsky\Desktop\amica already exists.
>> Error occurred while processing: Kozlovsky\Desktop\amica.
>> A subdirectory or file matlab\amicaouttmp\ already exists.
>> Error occurred while processing: matlab\amicaouttmp\.
>> Error in ==> runamica12 at 100
>> if ~isempty(strfind(computer,'64'))
>>
>> ??? Output argument "weights" (and maybe others) not assigned during 
>> call to "C:\Users\Ali
>> Kozlovsky\Desktop\amica matlab\runamica12.m>runamica12".
>>
>> Then I received a pop-up window titled 'Bad Input' with the following 
>> message:
>>
>> cannot create file in C:\Ali Kozlovsky\Desktop\amica matlab\amicaouttmp\
>>
>> I am running Windows 7 64-bits and MATLAB 7.12.0 (R2011a).
>> I have saved the runamica12.m file in a folder called 'amica matlab' 
>> on my Desktop.  This folder is in my MATLAB's set path.
>>
>> Any help will be very appreciated.  Thanks!
>>
>> Alisha Kozlovsky
>> Simon Fraser University
>>
>>
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