[Eeglablist] Problem with BrainMovie3d and Dipplot

[Arnaud Delorme]

The brainmovie function is deprecated (obsolete) and might not be fully compatible with dipfit any more.
It is better to use the version included in SIFT where it now lives.

In particular, I would use the latest version maintained by Tim Mullen

brainmovie3d_causal

Best,

Arno

On Aug 11, 2014, at 4:54 PM, Makoto Miyakoshi <mmiyakoshi at ucsd.edu> wrote:

> Dear Ramon,
> 
> Here is another report of a problem for you. Could you investigate it?
> 
> Makoto
> 
> 
> On Wed, Aug 6, 2014 at 4:34 PM, Iman M.Rezazadeh <irezazadeh at ucdavis.edu> wrote:
> Hi,
> 
> I have had a difficult time to run ‘brainmovie3d’ function. Basically, I calculated the required input arguments for it using ‘timef’ and ‘newcrossf’ functions and then call ‘brainmovie3d’:
> 
>  
> 
> [ersps{1,1},itcs{1,1},powbase,times,freqs] =  timef(icaact(1,:),2000,[0 2000],1000,0); %     1st comp
> 
> [ersps{2,1},itcs{2,1},powbase,times,freqs] =  timef(icaact(2,:),2000,[0 2000],1000,0); %     2nd comp
> 
>          
> 
>  [coh,mcoh,timesout,freqsout,cohboot,cohangles,allcoher,alltfX,alltfY]= newcrossf( icaact(1,:),icaact(2,:), 2000,[0 2000], 1000,0,'nfreqs',256);  %type', 'phasecoher',
> 
> coh_cell={[] coh};  cohangles_cell={[] cohangles};
> 
> brainmovie3d(ersps,itcs,coh_cell,cohangles_cell,times,[1:30]);
> 
>  
> 
>  
> 
> ‘brainmovie3d’ function goes  smoothly until it gets to the point that it wants to call ‘dipplot’ function. The first input argument of ‘dipplot’ is ‘dipstruct’ which SHOULD have xyz coordinates of selected components. HOWEVER in ‘brainmovie3d’ function and according to its Help, coordinates are  2-column array of [x y] coordinates of the selected components.  
> 
>  
> 
> Does anyone have any thoughts about this issue?
> 
> Best
> 
> Iman
> 
>  
> 
> -------------------------------------------------------------
> 
> Iman M.Rezazadeh, Ph.D
> 
>  
> 
> Research Associate II
> 
> Semel Intitute, UCLA , Los Angeles
> 
> & Center for Mind and Brain, UC DAVIS, Davis
> 
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> 
> -- 
> Makoto Miyakoshi
> Swartz Center for Computational Neuroscience
> Institute for Neural Computation, University of California San Diego

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