[Eeglablist] ICA related fields on the EEG struct

[Arnaud Delorme]

To make it short: yes you should reshape the matrix to make it 3-D. Note that, in your code, you should also select only these channels which are used for ICA

EEG.icaact = (EEG.icaweights*EEG.icasphere)*reshape(EEG.data(EEG.icachansind,:), EEG.nbchan, EEG.trials*EEG.pnts);
EEG.icaact = reshape(EEG.icaact, size(EEG.icaact,1), EEG.trials, EEG.pnts);

Arno

On Nov 17, 2014, at 12:06 PM, Yamil Vidal Dos Santos <hvidaldossantos at gmail.com> wrote:

> Dear all,
> I would like to know what are each ICA realted fields on the EEG struct (such as icaact, icaweights, icasphere). I remember finding this in a tutorial a long time ago, but now I cannot find it.
> 
> In particular I would like to know this. The field EEG.icaact is usually empty and can be filled by using the function icaact.m or by running something like the following line:
> 
> EEG.icaact = (EEG.icaweights*EEG.icasphere)*reshape(EEG.data, EEG.nbchan, EEG.trials*EEG.pnts);
> 
> But the resulting matrix is 2 dimensional (with all the trials concatenated). Is this correct? Or should I reshape it to have dimensions component x time x trial.
> 
> I'm asking these because I'm trying to use an automatic classifier to mark components as artifactual. The paper presenting the classifier is this one: http://www.behavioralandbrainfunctions.com/content/7/1/30
> Does anyone has experience using this classifier?
> Any alternative methods suggested?
> 
> Thanks,
> Yamil Vidal Dos Santos
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