[Eeglablist] name and location of PREPpipeline in EEGLAB

Makoto Miyakoshi mmiyakoshi at ucsd.edu
Wed Aug 5 10:10:26 PDT 2015


Dear Fernando,

> 1- I just wanted to know, the name of PREPpipeline after being downloaded
in EEGLAB, and where it can be found there (under which list)?

I haven't tested it yet so I don't know.

> 2- Can we consider "PREPpipeline" as an auto preprocessing stage where no
need to perform further steps?

Not necessarily. For example, PREPpipe does not apply high-pass filter at
all. You may want to apply highpass (and lowpass). If I remember correctly,
it does not clean the data other than rejecting bad channels. You may want
to go through either epoch rejection or apply ASR using clean_rawdata().

I guess PREPpile is intended to be used as the upmost stream process which
is very general and necessary for all types of data (or all types of
downstream processes).

Makoto

On Mon, Aug 3, 2015 at 12:02 PM, Fernando Lavin <fernandolavin78 at gmail.com>
wrote:

> Hello EEGLAB users and developers,
>
> After downloading the PREPpipeline that is described in the following
> paper:
>
> Bigdely-Shamlo, N., Mullen, T., Kothe, C., Su, K. M., & Robbins, K. A.
> (2015). The PREP pipeline: standardized preprocessing for large-scale EEG
> analysis. Frontiers in neuroinformatics, 9.
>
> 1- I just wanted to know, the name of PREPpipeline after being downloaded
> in EEGLAB, and where it can be found there (under which list)?
>
> 2- Can we consider "PREPpipeline" as an auto preprocessing stage where no
> need to perform further steps?
>
>
> Thank you.
>
> Fernando
>
>
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-- 
Makoto Miyakoshi
Swartz Center for Computational Neuroscience
Institute for Neural Computation, University of California San Diego
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