[Eeglablist] Toolbox for cluster analysis

Williams, Nitin J nitin.williams at helsinki.fi
Sat Mar 12 13:35:20 PST 2016


Hi,

Please excuse the shameless plug, this is to inform you about a MATLAB-based toolbox for cluster analysis that we have made available from:

http://www.mathworks.com/matlabcentral/fileexchange/55938-clustering-toolbox

The toolbox implements the following pipeline:

1. Denoising of raw-data prior to cluster analysis, using Empirical Mode Decomposition
2. Determining number of clusters using Stability Index, a bootstrap-based index
3. Initialise cluster centroids for k-means using method based on Genetic Algorithms
4. Visualisation of cluster analysis results using PCA-based method

For details of pipeline and example application to ensembles of ERP single-trials, refer:

Williams NJ, Nasuto SJ, Saddy, JD. Method for exploratory cluster analysis and visualisation of single-trial ERP ensembles.
Journal of Neuroscience Methods 250, 22-33.

http://www.sciencedirect.com/science/article/pii/S016502701500059X

Please also cite above paper when publishing results from applying this code!

Of course, any feedback/comments/queries welcome.

Thanks & regards,
Nitin
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