[Eeglablist] std_stat vs statcondfieldtrip syntax

[Eric Fields]

Hi Taylor and all,

You can calculate a cluster-based permutation test for your design in the
Factorial Mass Univariate Toolbox:

https://github.com/ericcfields/FMUT/wiki

Eric

-----
Eric Fields, Ph.D.
Postdoctoral Fellow
Cognitive and Affective Neuroscience Laboratory
<https://www2.bc.edu/elizabeth-kensinger/>, Boston College
Aging, Culture, and Cognition Laboratory <http://www.brandeis.edu/gutchess/>,
Brandeis University
eric.fields at bc.edu


On Mon, Feb 11, 2019 at 3:43 PM Arnaud Delorme <arno at ucsd.edu> wrote:

> Dear Taylor,
>
> Based on what I know Fieldtrip does not allow for n x m design correction,
> which is why statcondfieldtrip does not support it. The only way I know
> around this problem is to use LIMO which also uses cluster correction and
> allows arbitrary complex design. Unfortunately, the learning curve for LIMO
> is very steep and we want to make a couple of video tutorials but we do not
> have them yet.
>
> Best wishes,
>
> Arno
>
> > On Feb 6, 2019, at 11:03 AM, Taylor Hearn <thearn at asu.edu> wrote:
> >
> > Hi Everyone,
> >
> > I'm using EEGLAB to perform a cluster-based permutation test (Maris and
> Oostenveld) , and I was hoping to get some assistance in regards to
> syntax/data structure.
> >
> > My study involves 5 groups (stimulation location) and 2 conditions (pre-
> and post-stimulation, paired) with a different number of subjects in each
> group. I would like to perform a multi-sensor analysis as well because I do
> not know at which sensors the effect will be observed. This would be for
> both time-series and time-frequency data. Given this information, what
> would be the ideal way to structure the "data" cell array?
> >
> > Also, I'm a little unclear as to whether I should use the "std_stat" or
> the "statcondfieldtrip" function. I know I do not want the "statcond"
> function because I am looking to perform the cluster correction which is
> only in the fieldtrip function. Additionally, if someone could clarify the
> "fieldtripclusterparam" and "fieldtripchannelneighbor" (both in "std_stat")
> as well as the "neighbours" ("statcondfieldtrip") inputs.
> >
> > Any assistance is greatly appreciated!
> >
> > Thank you,
> > Taylor
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