[Eeglablist] Single trial connectivity analysis using SIFT

Makoto Miyakoshi mmiyakoshi at ucsd.edu
Wed Feb 8 14:42:31 PST 2023


Dear Sampath,

What model order did you use?
If you have no idea what it is, see my example (taken from Tim Mullen's)
that automatically optimizes the model order.
https://urldefense.com/v3/__https://github.com/sccn/groupSIFT/blob/cd56e3166cfccd898420532e4ef6a981550205f9/pop_groupSIFT_runSiftBatch.m*L384__;Iw!!Mih3wA!ALuRYGfzunk3OAEmHVIfzr-U0s4zEPesMkrnz3JoOh7C3qySpWRJF13a-fghwTPEN6Vbm1wxirwjOG-b5recqNTtDgE$ 
For continuous data processing, your sliding window length must be MUCH
longer. Consider > 10-20 s.

Makoto

On Wed, Feb 8, 2023 at 5:26 PM Sampath Thoutanahalli Kapanaiah <
sampath.kapanaiah at uni-ulm.de> wrote:

> Dear Makoto,
>
> Thank you very much for the reply. I use a modified script from your
> example continuous script,  although I still get below error more often.
>
> Warning: The specified AR model is unstable at timeindex 1.
> > In tvarsim (line 112)
>   In est_consistency (line 78)
>   In est_checkMVARConsistency (line 135)
>   In est_validateMVAR (line 210)
>   In pop_est_validateMVAR (line 147)
>
> Do you recommend any particular parameter? I am currently using the below
> parameters.
>
> WindowLengthSec     = 3;
> WindowStepSizeSec  = 3;
> algorithm                   = 'ARfit';   %%%Vieira-Morf, ARfit
> windowingType          = 'rectwin'; %%%%'hamming' or 'blackmanharris'
> detrend_method       = 'linear';
> normalise_method    = {'time'};
> connmethods             = {'iCoh' 'ffDTF' 'GPDC' 'RPDC' 'GGC' 'dDTF08'};
> GUI_MODE                   = 'nogui';
> VERBOSITY_LEVEL       = 0;
>
>
> Thank you very much for your time
>
> Best Wishes,
> Sampath
>
>



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