[Eeglablist] BINICA in Windows

[Makoto Miyakoshi]

Hi Andrew,

If you really need speed, try CUDAICA. It can be 15-25 times faster,
depending on your environment.
https://sccn.ucsd.edu/wiki/Makoto's_useful_EEGLAB_code#By_using_CUDAICA_.2805.2F09.2F2022_updated:_Thank_you_Ugo.2C_Yunhui.2C_John.2C_and_Ernie.21.29

Makoto

On Thu, Jan 16, 2025 at 1:24 PM Andrew Corcoran via eeglablist <
eeglablist at sccn.ucsd.edu> wrote:

> Hi list
>
> I'm rerunning some old preprocessing scripts and having some trouble
> getting the binica implementation of runica to work with my version of
> EEGlab (2024.2.1). The script runs fine with an archived version of EEGlab
> from 2021 so I assume I have not set up the binary correctly.
>
> I have tried copying over the binica.exe file from my archived version and
> updated icadefs.m to ensure the ICABINARY path is correct. Attempting to
> run binica via pop_runica produces the following error:
>
> Output argument "wts" (and possibly others) not assigned a value in the
> execution with "binica" function.
> Error in pop_runica (line 532)
>             [EEG.icaweights,EEG.icasphere] = binica( tmpdata, 'lrate',
> 0.001, g.options{:} );
>
> I would like to continue using binica given its speed advantages but am
> concerned that reproducibility of my analyses (by my future self and
> possibly others) will be hampered if binica is difficult to set up...
> Indeed,  I struggled to find a convenient download (for Windows) -- the
> github code seems to require compilation, which I don't recall doing
> previously. Is there a more straightforward alternative ?
>
> Thanks
> Andrew
>
>
> --
> Dr. Andrew W. Corcoran
> Post-doctoral Research Fellow
> Monash Centre for Consciousness & Contemplative Studies
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