[Eeglablist] Why doesn't BINICA show up as an option in ICA?

Jacob Anderson ande2523 at umn.edu
Sun May 11 19:22:06 PDT 2014


Hi Everyone,
Will the older Windows binary work on Windows 7 machines? I'm assuming that
Natalie isn't running XP. The only Windows version I know of is on BINICA
wiki page. Is there another version that's available?

Thanks,
Jake
On May 8, 2014 5:18 PM, "Natalie Prowse" <NatalieProwse at cmail.carleton.ca>
wrote:

>  ​Thank-you Makoto.  I have logged the bug (1604) and am using your work
> around.
>
>
>  regards,
>
> -Natalie
>  ------------------------------
> *From:* Makoto Miyakoshi <mmiyakoshi at ucsd.edu>
> *Sent:* Thursday, May 8, 2014 12:44 PM
> *To:* Natalie Prowse
> *Cc:* eeglablist at sccn.ucsd.edu
> *Subject:* Re: [Eeglablist] Why doesn't BINICA show up as an option in
> ICA?
>
>  Dear Natalie,
>
>  Sorry for inconvenience.
> I'd like to give you a temporal solution using a command line meanwhile
> you post it as a bug to bugzilla
> https://sccn.ucsd.edu/bugzilla/enter_bug.cgi
>
>  After loading the set file you want to decompose, run the following
> command.
>
>  [wts,sph] = binica(EEG.data(:,:), 'extended', 1);
> EEG.icaweights = wts;
> EEG.icasphere = sph;
> EEG = eeg_checkset(EEG, 'ica');
> eeglab redraw
>
>  Makoto
>
>
> 2014-04-30 11:59 GMT-07:00 Natalie Prowse <NatalieProwse at cmail.carleton.ca
> >:
>
>> Hi,
>>
>> I have the windows version of BINICA on my C: drive.
>>
>> I have verified that the PATH variable contains the path to the file:
>> C:\NICERLAB\Artifact_removal_code\BinICA
>>
>> I have verified that in the eeglab install
>> \functions\sigprocfunc\icadefs.m the ICABINARY variable is properly set:
>> ICABINARY = 'C:\NICERLAB\Artifact_removal_code\BinICA\ica.exe';
>>
>> And yet, after loading a Brain Vision file and then clicking on
>> Tools->Run ICA  I do not always get presented with BINICA as an option.  I
>> also have FASTICA installed, and it doesn't show up either.  This is RANDOM
>> - sometimes I see BINICA in the list, but more often times, I don't.  I
>> cannot pinpoint what is different when it's working vs not.
>>
>> Any ideas what could be interfering with EEGLab's ability to display the
>> BINICA or FASTICA option to me?
>>
>> Thanks,
>> -Natalie
>> _______________________________________________
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>
>
>
>  --
> Makoto Miyakoshi
> Swartz Center for Computational Neuroscience
> Institute for Neural Computation, University of California San Diego
>
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