[Eeglablist] Trouble running AMICA

Eric Rawls elrawls at email.uark.edu
Wed Oct 11 14:40:37 PDT 2017


Hi all,
I am interested in trying Jason Palmer's AMICA algorithm out but I am
having trouble getting it to run in any form. When I try running it from
the gui with defaut settings, I get the output:

Found datfile
mkdir: /Users/admin/path_to_data/amicaout/: File exists
           1 processor name = local-705.local
           1 host_num =    125801682
 This is MPI process           1 of           1 ; I am process           1
of
           1 on node: local-705.local
           1  : node root process           1 of           1
Processing arguments ...
 num_files =            2
 FILES:
 /Users/admin/path_to_data/data.fdt
 num_dir_files =            1           1
 initial matrix block_size =          128
 do_opt_block =            0
 blk_min =          256
 blk_step =          256
 blk_max =         1024
 number of models =            1
 max_thrds =            2
 use_min_dll =            1
 min dll =   1.000000000000000E-009
 use_grad_norm =            1
 min grad norm =   1.000000000000000E-007
 number of density mixture components =            3
 pdf type =            0
 max_iter =         2000
 Error: num_samples entries is less than num_files in paramfile
No gm present, setting num_models to 1
No W present, exiting
Reference to non-existent field 'W'.

Error in runamica15 (line 873)
    weights = mods.W(:,:,1);

Error in pop_runamica (line 239)
    [W,S,mods] = runamica15(datfile,arglist{:});

Error while evaluating Menu Callback


When I call runamica15 ( [EEG.icaweights EEG.icasphere] = runamica15(EEG))
directly, same message. I tried downloading the binary again in case that
was the issue but no luck. What am I doing wrong here?

Eric Rawls
Graduate Research Assistant
University of Arkansas
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