[Eeglablist] making dataset of timepoints x channels x epochs
Tarik S Bel-Bahar
tarikbelbahar at gmail.com
Tue Dec 4 23:23:18 PST 2018
Hello, some notes below for you.
For other questions or unanswered questions, it's recommended that you
follow good guidelines for questions to help lists.
Provide good examples and/or pictures, give details about the settings that
you are using in eeglab, and more details about errors messages you are
getting. Generally speaking, try to break down your questions into more
specific simpler questions.
Cheers!
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5. If you are new to eeglab, and you haven't had a chance to yet, first
review the eeglab wiki, and do the full eeglab tutorial with the eeglab
tutorial data, then you will get a better sense of what eeglab expects and
what usual kind of data is.
6. If you are new to eeg, it's best to start with reading/watching some
tutorials, google EEGLAB summerschool and ERPLAB for a wide range of
learning materials (videos, powepoints, papers). Steve Luck's handbook of
ERP can also help beginners with all the basic details.
7. Your dataset is highly unusual (much too short) and seems to have too
few and too short epochs for valid EEG analysis. it's best to find some
high-quality EEG articles (via Google Scholar) and emulate those (in terms
of total recording time, and total number of trials/epochs), and then start
over. Don't give up! But the most important thing is to have proper data
before starting your data processing
8. For normalization,in the first instance, emulate a high-quality
article using a protocol that is similar to yours.
9. You are unlikely to get an ERP without at least 20 to 50 trials per
condition. (so one would have 50 trials of your 2-4 second epochs for each
condition).
10. For your current data, try the following as some first steps: All
doable via GUI. Look an on eeglab wiki for basic instructions. Load each of
your datasets for one person (with the 2-4 second conditions). Preprocess
the files appropriately (e.g, filtering, cleaning, bad channel removal, and
other preprocessing steps that may be needed). Then append them so they are
one file. Then make an epoched .set file for each kind of event. Then
repeat for each subject all the previous steps.
11. Your epoching step that you tried should work, but you need to have
the same event name for each event in the dataset, and if you don't, you
need to create extra events in the .set file (e.g., at the start of each
trial). Also, eeglab will expect to cut each epoch into the same length, so
pay close attention to the settings in the epoching gui. For example if you
first event is at the start of the file, and one sets the epoch to take -1
sec to 2 seconds, then there must be data before the event.
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