[Eeglablist] Time-frequency transform became 150-450% faster (without using parallel computing toolbox)
Delorme, Arnaud
adelorme at ucsd.edu
Sun Nov 29 16:42:30 PST 2020
Hi Makoto,
Did you check the code of the timefreq function which is being used by the newtimef function of EEGLAB to compute time-frequency decompositions?
There are many different variants (some commented). Also, when using more than one channel, the time-frequency decomposition of all channels is computed together using a single matrix multiplication. If you think your solution might still be useful, it would be great to add it to the timefreq function.
Cheers,
Arno
> On Nov 29, 2020, at 2:25 PM, Makoto Miyakoshi <mmiyakoshi at ucsd.edu> wrote:
>
> Dear EEGLAB users,
>
> I ran an experiment to test if removing for-loops can speed up
> time-frequency transformation. For epoched data, I confirmed 150%-200% of
> processing speed. The more time/frequency point there are, the more
> efficient it became. The most noticeable effect was found when I processed
> a continuous data with it. I confirmed speed increase to 450%. If you are
> interested in trying it out, please download the modified timefreq.m from
> the following link.
>
> https://sccn.ucsd.edu/wiki/Makoto's_useful_EEGLAB_code#How_to_perform_time-frequency_transformation_faster_.2811.2F29.2F2020_added.29
>
> This is a beta test. When you encounter a bug or problems, please let me
> know.
>
> Makoto
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