[Eeglablist] Run AMICA

[Omid Sefat]

Thank you, Dear Jason,

I think I've found what the problem is, If I want to run AMICA after
epoching, then the following code would not work. I should use EEG instead
of EEG.data. Does it correct?

runamica15(EEG.data, 'num_chans', EEG.nbchan,...
                'outdir', ['D:\amicaouttmp\' EEGname],...
                'pcakeep', dataRank, 'num_models', 1,...
                'do_reject', 1, 'numrej', 15, 'rejsig', 3, 'rejint', 1)


Best,
Omid

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02/21/22,
10:49:30 PM

On Mon, Feb 21, 2022 at 7:45 PM Jason Palmer <japalmer29 at gmail.com> wrote:

> Hi Omid,
>
> Check the AMBIN variable in your runamica15.m. If the gui works, make sure
> the runamica15 that the plugin refers to is the same as the one that the
> command line uses (use "which"). The latest plugin was recompiled for newer
> Windows laptops, which the older version didn't work on, so that may also
> be an issue.
>
> Best,
> Jason
>
> On Tue, Feb 22, 2022, 1:03 AM Omid Sefat via eeglablist <
> eeglablist at sccn.ucsd.edu> wrote:
>
>> Dear all,
>> I encountered a strange problem. The batch code I wrote used to work, but
>> now AMICA does not work.
>>
>> The important thing is that I can run AMICA  through the GUI, and it works
>> properly, but it does not run with the following code that worked before.
>> (It is based on Makoto's code)
>>
>> runamica15(EEG.data, 'num_chans', EEG.nbchan,...
>>                 'outdir', ['D:\amicaouttmp\' EEGname],...
>>                 'pcakeep', dataRank, 'num_models', 1,...
>>                 'do_reject', 1, 'numrej', 15, 'rejsig', 3, 'rejint', 1)
>>
>> Best regards,
>>
>> --
>> Omid
>>
>>
>>
>>
>>
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>> 02/21/22,
>> 07:25:00 PM
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-- 
Omid Sefat
PhD student
Institute for Cognitive Science Studies
Tel :+98-912-817-0063