[Eeglablist] Premature infants preprocessing pipeline with EEGLab tools

[Marco Buiatti]

Hi Efthymios,

I think it would be feasible to avoid the removal of flat lines in NEAR. I
put you in contact with Velu Kumaravel (cc), the developer of NEAR, maybe
he can help you.

Best,

Marco

On Mon, 5 Aug 2024 at 11:09, Efthymios Papatzikis <efp331 at mail.harvard.edu>
wrote:

> Dear Marco,
>
> Thank you for this email. My inquiry still stands indeed, although I have
> managed since then to create an analysis and statistical preprocessing
> configuration of steps for my specific needs.
>
> Thank you for sharing your pipeline, though. Very informative and
> particularly the ASR configuration (TuneASR) part. I will definitely study
> this as it will provide me valuable input. However, I see your pipeline
> does exactly what I am trying to avoid; that is, reject flat lines instead
> of accounting for them in the preprocessing pipeline. This is a main
> characteristic (i.e., continuity/discontinuity ratio) of premature
> infants that I am working with in my project, and all along, from the very
> beginning, I was trying to find a pipeline pre-configured for that. I
> couldn’t, so I tried to create mine. Still needs some fine-tuning of
> course, but now it seems to do what is meant for.
>
> Happy to discuss more if you are interested.
>
> Best,
> Efthymios
>
> On 5 Aug 2024, at 10:47, Marco Buiatti <marco.buiatti at unitn.it> wrote:
>
> Dear Efthymios,
>
> If your request is still ongoing, I suggest you to also consider NEAR, our
> pipeline for artifact removal in newborn and infant EEG data, available as
> an EEGLAB plugin:
> https://urldefense.com/v3/__https://github.com/vpKumaravel/NEAR__;!!Mih3wA!D57UmdQYinCHOCnNcTXyb5ed0ro9PGfYVitKTCNZMOxsrMzHF4nV8z_xZrPuVwvGXsXm0AarWKpzM6vc4U4rkhRaFT3hO6A$ 
>
> Best,
>
> Marco
>
> On Tue, 19 Mar 2024 at 22:41, Dr. Efthymios Papatzikis via eeglablist <
> eeglablist at sccn.ucsd.edu> wrote:
>
>> Dear List,
>>
>> Is there anyone who has experience with EEGLab on data from premature
>> infants, and can suggest a preprocessing pipeline or relevant published
>> articles where EEGLab tools have been used to preprocess the data?
>>
>> Any suggestions more than welcome.
>>
>> Dr. Efthymios Papatzikis
>> Infant Brain Development
>> Oslo Metropolitan University, Norway
>>
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>
>
> --
> Marco Buiatti
>
> Baby Lab & Neonatal Neuroimaging Unit
> Center for Mind/Brain Sciences
> University of Trento,
> Piazza della Manifattura 1, 38068 Rovereto (TN), Italy
> E-mail: marco.buiatti at unitn.it
> Phone: +39 0464-808178
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>
>

-- 
Marco Buiatti

Baby Lab & Neonatal Neuroimaging Unit
Center for Mind/Brain Sciences
University of Trento,
Piazza della Manifattura 1, 38068 Rovereto (TN), Italy
E-mail: marco.buiatti at unitn.it
Phone: +39 0464-808178
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